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Release notes

Issues are found in https://gitlab.com/DPIPE/labautomation/tsd-import

v7.0

  • #39 Change sample archive path on TSD, remove uploading multiQC results to megaQC in the filelock and filelock accept ora and cram files

v6.0

  • #22 Use new TSD/NSC folder structure
  • #25 Skip analyses folder in transfer area for NSC pipelines
  • #26 filelock-exporter-api safeguard subprocess calls
  • #27 The nsc-exporter handles duplicates

v5.0

  • #14 Use put --recursive for nsc-exporter
  • #21 Handle folders in s3api which already exist on the destination
  • #20 Use rotated log for filelock-exporter-api
  • #19 Fix 2 log files
  • #18 Stream s3cmd logs to nsc-exporter logs
  • #17 Trap to remove NSC-exporter-ACTIVE
  • #16 Catch HTTPErrors
  • #8 Stop EKG samples with low number of sequencing reads into pipeline
  • #24 Add overwrite policy to filelock-exporter-api

v4.2.1

  • #12 Create release template
  • #13 Add handstand as code owner

v4.2

  • [#9] Adapt lims export to new structure of gene panels

v4.1

  • [#6] Make lims exporter handle reanalysis of cardio samples (Xuyang Yuan)